Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRC rs113351960 chr2:2598392 A/G 3.6E-5 523 39.7 41.87 8.35 KM Plot
KIRC rs113385165 chr6:2381985 A/AC 6.93E-5 509 41.27 38 19.03 KM Plot
KIRC rs113410541 chr21:44261530 G/A 2.1E-7 516 41.13 31.75 7.18 KM Plot
KIRC rs11343900 chr1:33645516 GT/G 6.11E-5 524 41.27 40.3 21.53 KM Plot
KIRC rs113486386 chr9:6714126 TA/AA 3.22E-5 518 40.57 42.67 20.67 KM Plot
KIRC rs113489878 chr19:54040145 G/A 4.08E-5 518 39.17 42.65 19.27 KM Plot
KIRC rs113527114 chr21:44258680 T/C 2.1E-7 516 41.13 31.75 7.18 KM Plot
KIRC rs113603744 chr21:44266421 A/T 2.1E-7 516 41.13 31.75 7.18 KM Plot
KIRC rs113677451 chr21:44320241 C/T 7.63E-10 517 42.75 34.87 7.18 KM Plot
KIRC rs113702725 chr2:67533129 T/C 1.98E-7 523 39.85 37.73 2.03 KM Plot
KIRC rs113828183 chr21:44259057 G/A 2.1E-7 516 41.13 31.75 7.18 KM Plot
KIRC rs113873734 chr9:6717454 A/G 7.03E-5 512 40.57 43 19.68 KM Plot
KIRC rs114035015 chr8:763981 G/T 0 524 38.88 49.57 2.13 KM Plot
KIRC rs11408554 chr2:2613784 AT/A 3.94E-5 526 39.7 41.27 8.35 KM Plot
KIRC rs114457912 chr8:765659 T/C 0 524 38.88 49.57 2.13 KM Plot